Automated subtyping of HIV-1 genetic sequences for clinical and surveillance purposes: performance evaluation of the new REGA version 3 and seven other tools.

BACKGROUND To investigate differences in pathogenesis, diagnosis and resistance pathways between HIV-1 subtypes, an accurate subtyping tool for large datasets is needed. We aimed to evaluate the performance of automated subtyping tools to classify the different subtypes and circulating recombinant f...

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Bibliographic Details
Main Author: Pineda-Peña,,  A.C. (author)
Other Authors: Faria, Nuno Rodrigues (author), Imbrechts, Stijn (author), Libin,, P. (author), Abecasis, Ana (author), Deforche, K (author), Ruano Gómez , Lorena (author), Gomez-Lopez, Arley (author), Camacho, Ricardo Jorge (author), de Oliveira, T. (author), Vandamme, Anne-mieke (author)
Format: article
Language:eng
Published: 2021
Subjects:
Genetics
Software
Ecology, Evolution, Behavior and Systematics
Infectious Diseases
SDG 3 - Good Health and Well-being
Online Access:http://hdl.handle.net/10362/116966
Country:Portugal
Oai:oai:run.unl.pt:10362/116966

Internet

http://hdl.handle.net/10362/116966

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