McClintock: an integrated pipeline for detecting transposable element insertions in whole-genome shotgun sequencing data

Transposable element (TE) insertions are among the most challenging types of variants to detect in genomic data because of their repetitive nature and complex mechanisms of replication. Nevertheless, the recent availability of large resequencing data sets has spurred the development of many new meth...

Full description

Bibliographic Details
Main Author: Nelson, Michael G. (author)
Other Authors: Linheiro, Raquel S. (author), Bergman, Casey M. (author)
Format: article
Language:eng
Published: 2018
Subjects:
Online Access:http://hdl.handle.net/10400.14/26009
Country:Portugal
Oai:oai:repositorio.ucp.pt:10400.14/26009