4Pipe4 – A 454 data analysis pipeline for SNP detection in datasets with no reference sequence or strain information

Next-generation sequencing datasets are becoming more frequent, and their use in population studies is becoming widespread. For non-model species, without a reference genome, it is possible from a panel of individuals to identify a set of SNPs that can be used for further population genotyping. Howe...

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Bibliographic Details
Main Author: Pina-Martins, Francisco (author)
Other Authors: Vieira, Bruno M. (author), Seabra, Sofia G. (author), Batista, Dora (author), Paulo, Octávio S. (author)
Format: article
Language:eng
Published: 2020
Subjects:
Computer Simulation
Genome, Human
Genotyping Techniques
Humans
Models, Molecular
Reproducibility of Results
Databases, Genetic
High-Throughput Nucleotide Sequencing
Polymorphism, Single Nucleotide
Software
Online Access:http://hdl.handle.net/10451/43955
Country:Portugal
Oai:oai:repositorio.ul.pt:10451/43955

Internet

http://hdl.handle.net/10451/43955

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