Pattern matching through Chaos Game Representation: bridging numerical and discrete data structures for biological sequence analysis

This work was partially supported by FCT through the PIDDAC Program funds (INESC-ID multiannual funding) and under grant PEst-OE/EEI/LA0008/2011 (IT multiannual funding). In addition, it was also partially funded by projects HIVCONTROL (PTDC/EEA-CRO/100128/2008, S. Vinga, PI), TAGS (PTDC/EIA-EIA/112...

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Bibliographic Details
Main Author: Vinga, Susana (author)
Other Authors: Carvalho,  Alexandra M (author), Francisco, Alexandre P (author), Russo,  Luis M S (author), Almeida,  Jonas S (author)
Format: article
Language:eng
Published: 2017
Subjects:
TANDEM REPEATS
DNA-SEQUENCES
GENOMIC SIGNATURE
TREES
ULTRAFAST
EFFICIENT ALIGNMENT
ALGORITHM
SHORT READ ALIGNMENT
CLASSIFICATION
SEARCH
Online Access:http://hdl.handle.net/10362/23351
Country:Portugal
Oai:oai:run.unl.pt:10362/23351

Internet

http://hdl.handle.net/10362/23351

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